Cell Size 3D

The 2D cell size is calculated as the average length of 8 equally separated radii in every detected cell. Then, for 3D, a factor is applied:

$$ {\overline{\phi}_{3D}=1.273\cdot\overline{\phi}_{2D}} $$

Anisotropy

Average of the ratios between the largest diameter and its perpendicular of every cell. The maximum anisotropy angle is the average angle of the largest diameter of all cells with respect to the horizontal.

Cell density

Ratio between the total detected area and the number of cells. A theoretical value is also calculated using the relative density (ρ_r):

$$ { N_{v} = \frac{6(1-\rho_{r})}{\pi \overline{\phi}_{3D}} } $$

Supervision

Check the option "Results supervision" to remove bad detections and perform user-assisted inferences in the images.